PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr06632.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 228aa MW: 25876.8 Da PI: 7.8014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr06632.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.3e-10	15	65	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 +++E++RR++++s + +L +++P+ +++ +sk l +iLe+A+ Y+ +L Dr06632.1 15 RKIIEKNRRKHMKSLLLQLSSIIPQsQPS-GSKNaLKQKDILEEATSYVGKL 65 579********************5544.44445***********9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MQSGWCSKHA VKLERKIIEK NRRKHMKSLL LQLSSIIPQS QPSGSKNALK QKDILEEATS 60 YVGKLRERVE TLENEKTEMK MKMSMQRNQM MNINDRKVAV HVQCFDDCIK IVLMSTLNKC 120 FKSYEVIRIL GEEGAQVIHA NLTRSGDKIV FVIHSQWSGT NPLETPGMCT SLGGTSEDET 180 VLTWVLEPSV HNHYSQFSEI CPQPRIELSP LSESSIGDPC TNRTDILE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	4e-07	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr06632.1