PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07262.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 225aa MW: 25427.9 Da PI: 8.45

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07262.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.1	7.1e-40	5	131	3	127
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +GfrF+Pt+eelv++yLk+ +++k+ ++++vi+ +d+y+++Pw+Lpk ++++ ++w+fFs+ ++++a+g r++r+t++g+Wkatg+ v+s +++ Dr07262.1 5 VGFRFSPTEEELVSFYLKNMLDNKRQDIQSVIPILDVYSFDPWQLPKmagePCNKDGEQWFFFSPMQESEAHGGRRTRMTQAGFWKATGSPSFVYS-TDR 103 7*************************999***********645553445778**********************************.899 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 ++ +kkt+vfy+gr+p g kt+W m+ey+ Dr07262.1 104 AIAVKKTMVFYTGRTPFG-KTKWKMNEYK 131 9************8.*******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MERSVGFRFS PTEEELVSFY LKNMLDNKRQ DIQSVIPILD VYSFDPWQLP KMAGEPCNKD 60 GEQWFFFSPM QESEAHGGRR TRMTQAGFWK ATGSPSFVYS TDRAIAVKKT MVFYTGRTPF 120 GKTKWKMNEY KALEGTTSKL RNEFSLCRVY IKSGCLRAFD RRPVGLGIEN QRMGIESSST 180 SSSSPSSIIA PLAVEGTSSH KSSSSAELVI TDDMQMLGDI DLNWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44350.2	2e-69	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr07262.1