PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07292.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HD-ZIP
Protein Properties Length: 693aa    MW: 76429.9 Da    PI: 5.9567
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07292.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.81.2e-201671156
               TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
               +++ +++t+ q++eLe++F+++++p++++r +L+++l+L+ rq+k+WFqNrR+++k
  Dr07292.1 16 KKRYHRHTPRQIQELEAVFKECPHPDEKQRMQLSRELSLEPRQIKFWFQNRRTQMK 71
               688999***********************************************998 PP
2START161.37.4e-512124362206
                HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
      START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                la  a +el+++a+ ++p+W k      + +n +++ ++f++ +        ++ea+r+s++v+m++++ ve ++d + +W e +     +a ++ev++ 
  Dr07292.1 212 LATNAIEELIRMAQTDQPLWIKPGgdgiDVLNLETYERIFSRPGRqykspdTRVEASRDSTHVFMNAETIVEMFIDPM-KWAEFFStivsRARIIEVLTG 310
                677899****************99999999999999999977555899**99**************************.**999999999********** PP

                T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HH CS
      START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hw 179
                g      g l+lm  elq+lsp+v+ R+f f+Ry +q ++g w+i+dvSv++ ++ +      R+++lpSg+li++++ng+skvtwveh++ ++ +  h+
  Dr07292.1 311 GiggtrsGSLVLMHEELQVLSPVVSkREFIFLRYFQQIEQGLWAIADVSVNVSAECQ-FTTPSRSRKLPSGCLIHEMPNGYSKVTWVEHMEIEDESStHN 409
                ***************************************************999988.56667999**************************999988** PP

                HHHHHHHHHHHHHHHHHHHHTXXXXXX CS
      START 180 llrslvksglaegaktwvatlqrqcek 206
                ++r lv+sg+a+ga++w+atlqr ce+
  Dr07292.1 410 MYRDLVESGAAFGAQRWLATLQRMCER 436
                *************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    
MDSGEEIEGV EAQRKKKRYH RHTPRQIQEL EAVFKECPHP DEKQRMQLSR ELSLEPRQIK  60
FWFQNRRTQM KAQHERADNC SLRAENDKIR CENIAIREAL KKIMCPTCGS PPVAEDSYFD  120
EQKLRMENAR LKEELDRVST IASKYLGRPI TQLPPVQPIP VSSLDLSVGG YGGVQSGLGP  180
SLDLLPGSSS SAMQLGYPSA VSEMEKPIFA ELATNAIEEL IRMAQTDQPL WIKPGGDGID  240
VLNLETYERI FSRPGRQYKS PDTRVEASRD STHVFMNAET IVEMFIDPMK WAEFFSTIVS  300
RARIIEVLTG GIGGTRSGSL VLMHEELQVL SPVVSKREFI FLRYFQQIEQ GLWAIADVSV  360
NVSAECQFTT PSRSRKLPSG CLIHEMPNGY SKVTWVEHME IEDESSTHNM YRDLVESGAA  420
FGAQRWLATL QRMCERFACL MVVGTTQDDI GGGVVPSPEG KRSMMKLAQR MMNNFCTSLS  480
ASNGHQWTSL SGLNEVGVRV SVHKSTDPGQ PNGVVLSAAT SFWLPVPSDI VFSFFKDERT  540
RSQWDVLSNG NTVQEVAHIA NGSHPGNCIS LLRAFNASQN NMLILQESCT DASGSLVVYA  600
PVDLQGINVV MSGEDPSYVP LLPSGFAIVP DGRAGGASTS SNPMTGSLIT VQFQILVSSL  660
PSAKLSAESV NTVNNLISAT VQQIKAGLNC SSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein