PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07334.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 243aa    MW: 26153.8 Da    PI: 5.523
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07334.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.0009587107323
                ETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                Cp C+ sFs+  +   H+ ++
  Dr07334.1  87 CPVCNLSFSSEADVAAHLDSC 107
                *****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEEMKDKMKG LMKKVNNPFS SKFQGQGRVL GSAPSSSPSR NPPPPATLPS SRSVLKPLRP  60
PADPVPDTDP KPSPSFGRPS APATIDCPVC NLSFSSEADV AAHLDSCLSN SAVTACVSSF  120
ISGKPGKESV EIVLKLLRNV VREPENDKFR RIRMGNPKIK EAVGDVKGGV ELLECVGFQI  180
AEDGGEIWAT MEVPDEERIR VVKDAVASLE RLSLDESSSA TIAPKEPKEF GSSVEQEKID  240
RQV