PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07357.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 410aa MW: 46544.4 Da PI: 5.0682

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07357.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.1	5.3e-34	58	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkatg 87 lp+G++F+P+d+elv++ L+k +g++ + +e+i++vd i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++tg Dr07357.1 58 LPKGVKFDPSDQELVWHLLAKVGQGDRkphpfI--NEFIPTVDeddgICYTHPQKLP-GVKQDGSMSHFFHRTFKAYNTGTRKRRKINyddgDVRWHKTG 154 799**********888877777766775432..334665544556******.677888899**************8666655778* PP NAM 88 kdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k+k+v +ge+ g+kk++v+y + + k ekt+Wvmh+y+l Dr07357.1 155 KTKPVXI-DGEHLGCKKIMVLYmsTTKGGKCEKTNWVMHQYHL 196 ***.999*******5434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MSGPSWLVDS KRIASKIKNA TEIVDPXKFK WKSNPCKACP SCNHVIDNSD VVQDWPGLPK 60 GVKFDPSDQE LVWHLLAKVG QGDRKPHPFI NEFIPTVDED DGICYTHPQK LPGVKQDGSM 120 SHFFHRTFKA YNTGTRKRRK INYDDGDVRW HKTGKTKPVX IDGEHLGCKK IMVLYMSTTK 180 GGKCEKTNWV MHQYHLGTGE DEKDGEYVVS KIYYQQQSKQ IEKSGQDLQP EIVEAEFVEV 240 ESVPCPKSVN LQXVDKESPT LTASNISDAE VYCHETRDAD NCRRIQCENT EKINDQENPP 300 LAKENEWWEG ESQFLLDSQQ LAEGIAICEE FLQSQSSCGG DEPKISKPRI SDYAHMGVEN 360 LKKDLEECQN LPQVDRSNIE FDTPPDMRLS QLEFGSQDSF LAWAGTKLAD

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MSGPSWLVDS KRIASKIKNA TEIVDPXKFK WKSNPCKACP SCNHVIDNSD VVQDWPGLPK  60
GVKFDPSDQE LVWHLLAKVG QGDRKPHPFI NEFIPTVDED DGICYTHPQK LPGVKQDGSM  120
SHFFHRTFKA YNTGTRKRRK INYDDGDVRW HKTGKTKPVX IDGEHLGCKK IMVLYMSTTK  180
GGKCEKTNWV MHQYHLGTGE DEKDGEYVVS KIYYQQQSKQ IEKSGQDLQP EIVEAEFVEV  240
ESVPCPKSVN LQXVDKESPT LTASNISDAE VYCHETRDAD NCRRIQCENT EKINDQENPP  300
LAKENEWWEG ESQFLLDSQQ LAEGIAICEE FLQSQSSCGG DEPKISKPRI SDYAHMGVEN  360
LKKDLEECQN LPQVDRSNIE FDTPPDMRLS QLEFGSQDSF LAWAGTKLAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-151	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr07357.1