PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07416.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 206aa MW: 23790.3 Da PI: 8.2551

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07416.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	62.5	7.4e-20	3	58	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES.--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg.eHnhe 59 +Dgy+WrK+GqK+ + e++rsYY Ct+++C+vk++ve +a d+ v+ i+Y+g +H+h+ Dr07416.1 3 EDGYSWRKFGQKQ--SGENSRSYYYCTYPNCKVKRNVEYNA-DGVVTMIVYKGgDHKHS 58 8*********8..67899****************9.******9648997 PP
2	WRKY	95.3	4.3e-30	134	192	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGq++v+g+ +pr+Y+rCt+ gC+v+k vers++++k+v++tYeg+Hnhe Dr07416.1 134 LDDGYRWRKYGQRTVRGNLNPRNYFRCTYLGCSVRKYVERSSSNEKAVITTYEGRHNHE 192 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MAEDGYSWRK FGQKQSGENS RSYYYCTYPN CKVKRNVEYN ADGVVTMIVY KGGDHKHSKP 60 DQPDHRQFST DVMNEEIKNE PIRLCDSPQP AFEGIELNFK RIKVEACATD LKSTSRAELE 120 PXFVIQTISE VDLLDDGYRW RKYGQRTVRG NLNPRNYFRC TYLGCSVRKY VERSSSNEKA 180 VITTYEGRHN HEVPAAYGSQ FCTSVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30250.1	2e-57	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr07416.1