PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07425.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

G2-like

Protein Properties

Length: 239aa MW: 26638.4 Da PI: 8.6896

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07425.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.8e-34	27	81	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ekAtPkti+++m+vkgLtl h+kSHLQkYRl Dr07425.1 27 KPRLRWTADLHERFVDAVAQLGGPEKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 81 79****************************************************8 PP
2	Myb_DNA-binding	71.6	1.3e-22	29	80	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+ktI+rtmg kg+tl ++ks++qky+ Dr07425.1 29 RLRWTADLHERFVDAVAQLGGPekaTPKTIMRTMGvKGLTLFHLKSHLQKYR 80 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MFSGLIHRQE ASEEIHGPSL VLTADPKPRL RWTADLHERF VDAVAQLGGP EKATPKTIMR 60 TMGVKGLTLF HLKSHLQKYR LGKQSGKEMT EQPKDASYLL EAPSSSISSP RVPTPDVNEG 120 HEVKEALRAQ MEVQRRLHEQ VEVQKHVQIR MDAYQKYIDT LLEKACKIAT EQIAASGFNS 180 AASDLTDMVT RVMIPADPLS PSSFNQLSMG GISVHSPGHS ATDGRYFHQK FPELRRNAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	6e-77	G2-like family protein

Link Out ? help Back to Top
Ensembl	Dr07425.1