PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07462.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 350aa    MW: 39133.4 Da    PI: 6.5184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07462.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.93.7e-1854103255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                r +h++ E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI++Lq
  Dr07462.1  54 RSKHSATEQRRRSKINERFQILRDLIPHS----DQKRDKASFLLEVIEYIHYLQ 103
                889*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEAASDSGRE FPEPDEPFEG EPWRRNGSSR KGEMMMRMDG VGRDQKSGEP TTPRSKHSAT  60
EQRRRSKINE RFQILRDLIP HSDQKRDKAS FLLEVIEYIH YLQEKAQKYE SIQPGWIQEN  120
EKLVPWTNNQ GPVDGIPDAS QIMKNGPSPG FMFGKFDERN MPLAPSILSN AHNPTESDMR  180
AGVQSNLYAT VGGETNHTQQ QQQRLVSNSD NLASHSQSPW LRSYNVADCT LSSDILNEQE  240
GLAIDEGTIS VSSVYSHGCF VLFPVKPILR LLLGALSQAL QSSGLDLSQA NVSVQINLGK  300
RAARRRTTNH MTNLRDQNDP SGNQAMEHSR VGSSDEESEK ALKKHRSDSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-50bHLH family protein