PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07495.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 228aa MW: 25172.4 Da PI: 6.6348

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07495.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00024	37	85	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f eL +l ++ + + Ka iL A++ +++L Dr07495.1 37 KIHKAEREKLKRDHLNELFLELGHVLEPS----RQNNGKACILGDATRLLRDL 85 567889*****************999997....57788888888888877766 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MTPNQSPSMV DDANVIAENM AGEALPNRKN NGKIPKKIHK AEREKLKRDH LNELFLELGH 60 VLEPSRQNNG KACILGDATR LLRDLIAQVK SLRKENAALV SESSYVTVEK NELKDENLVL 120 EAEIERLQNE LRGRLQTDSA PPQTTTVTSA QPMQQPPLVG PLFVVPLHQG IHQEIEPCNE 180 AEAAPKPPSL VRRPQARYPA PSDSWPLELL SRHQHSASSS SATTNSGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	1e-42	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr07495.1