PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07510.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 314aa    MW: 34886.6 Da    PI: 6.5104
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.3e-21155204255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Dr07510.1 155 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDQAAFKLRG 204
                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MATAIDMLNS WPSFSTDPLE EELMQALEPF IKSASPSSPL DLSSSSSSTS SPSPLSSSYP  60
LSSSSSSSSS SYPYQNPNFF TTFSTLSHPQ SSHHEFITPL NPFQIQQIQA QIQYQQQQHQ  120
YQLNHGFNSM NFLRPRAQPM KHSSSPAIPA KPTKLYRGVR QRHWGKWVAE IRLPKNRTRL  180
WLGTFDTAEE AAMAYDQAAF KLRGDFARLN FPHLRHSSAT SPLPTSVNAK LQAICQSMAA  240
TTSSPPKPSS PPPPDNKSET SSEADADFCS SSSGSSPASE MQSLDFTEVP WDESESFHLR  300
KYPSWEIDWD AILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-47ERF family protein