PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07651.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 347aa    MW: 39675.8 Da    PI: 4.8682
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07651.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.55e-13137188155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +r++h ++Er+RR+++N+ +  Lr+l+P++   + ++ + a+i   A+e++++L+
  Dr07651.1 137 QRMTHIAVERNRRKQMNEHLRVLRSLMPSS---YVQRGDQASIIGGAIEFVRELE 188
                79****************************...9*****************9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDKEVDETYS GVKEYSENYF TDVMQFADFG PRLSLNQTRN IVSEDENYFS RFPISNEKMQ  60
EDAFMVVTPP MPLAFPPLGV RERNEEENEE GRFSENASSV QQQCFVTGFB ZKMVGGEGKN  120
KRRKTRTMKT TEEVESQRMT HIAVERNRRK QMNEHLRVLR SLMPSSYVQR GDQASIIGGA  180
IEFVRELEQL LQCLESQKRR RIFGGGEAHR NIGDVSSIPI QQCQQPPLFS PIEIQDGDQM  240
KLPEFLPNGP REEMAENKSC VADIEVRLLG FDAMIKILSK RRPGQLLKTI AALEEMQLSI  300
LHTNITTIEQ TVLYSFNVKI MVEXRSSAEE IANSVQQILS FIDASTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138149RMTHIAVERNRR
2198202KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.12e-94bHLH family protein