PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr07681.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 397aa MW: 45129.4 Da PI: 4.534

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr07681.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	25.3	4.4e-08	89	144	1	49
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpk 49 lp+G++F+P+d+el+ e+L+ kv ++ ++ e +++e +i++++P++Lp Dr07681.1 89 LPAGVKFDPSDQELL-EHLAGKVGLDNskshmfID--EfipTLEEDqGICYTHPENLPG 144 799**********.999877745553322..23222443347*******93 PP
2	NAM	41.1	5.5e-13	147	196	80	128
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+vl+ +g ++g kk++v+y ++r k+ k++Wvmh+y+l Dr07681.1 147 HVRWHKTGKTKPVLE-NGVQKGWKKIMVLYksSKRGCKPDKANWVMHQYHL 196 568**********.999*******4334666788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MWESSQLFIP KYYKKMIFAD RTPKVQKTSL DSCSRTWLVN SRGIARKVKN ATIFSDYQIK 60 DFGAEAEREC PNCKHIIDNS DVSLEWPGLP AGVKFDPSDQ ELLEHLAGKV GLDNSKSHMF 120 IDEFIPTLEE DQGICYTHPE NLPGNEHVRW HKTGKTKPVL ENGVQKGWKK IMVLYKSSKR 180 GCKPDKANWV MHQYHLGSEE EEKDGELVVS KVLYQPQTKP AEKNETDMDN EDMDVLAIKT 240 GPRTPKTNTP KPPRPRTNLP DDEELEHNFQ IIPEQLKDNQ ETSTTESVLP VSLNECVNPT 300 WCAGESQAVE DPDPNINDEA LLCHEDLDSF PAFEDSSLQF QFPDLDHSKN EIPGKINNSL 360 SGIYDLDNIE IDTPPDFQLA DLQFGSQDSI TSWLDRL

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MWESSQLFIP KYYKKMIFAD RTPKVQKTSL DSCSRTWLVN SRGIARKVKN ATIFSDYQIK  60
DFGAEAEREC PNCKHIIDNS DVSLEWPGLP AGVKFDPSDQ ELLEHLAGKV GLDNSKSHMF  120
IDEFIPTLEE DQGICYTHPE NLPGNEHVRW HKTGKTKPVL ENGVQKGWKK IMVLYKSSKR  180
GCKPDKANWV MHQYHLGSEE EEKDGELVVS KVLYQPQTKP AEKNETDMDN EDMDVLAIKT  240
GPRTPKTNTP KPPRPRTNLP DDEELEHNFQ IIPEQLKDNQ ETSTTESVLP VSLNECVNPT  300
WCAGESQAVE DPDPNINDEA LLCHEDLDSF PAFEDSSLQF QFPDLDHSKN EIPGKINNSL  360
SGIYDLDNIE IDTPPDFQLA DLQFGSQDSI TSWLDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	7e-68	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr07681.1