PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr07983.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NF-YB
Protein Properties Length: 150aa    MW: 16424.2 Da    PI: 5.9784
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr07983.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB183.22.1e-5712107297
      NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                +eqdrflPianvsrimkk+lP+nakisk+aketvqecvsefisf+t+easdkcqrekrktingddl+wa++tlGfe+yveplk+yl+k+re+eg+k
  Dr07983.1  12 KEQDRFLPIANVSRIMKKALPGNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLIWAMTTLGFEEYVEPLKLYLQKFREMEGDK 107
                89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MADSDNESGG AKEQDRFLPI ANVSRIMKKA LPGNAKISKE AKETVQECVS EFISFITGEA  60
SDKCQREKRK TINGDDLIWA MTTLGFEEYV EPLKLYLQKF REMEGDKLGP GSAQQHKDSG  120
NGGAIANNVN SMFMYGSGSS TSSXARQGRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-69NF-YB family protein