PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08041.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 157aa    MW: 17557.7 Da    PI: 7.4338
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08041.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.14.6e-132466248
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
               gy GVr++  +g ++A I  p++   +kr++lg+f+t+eeAa a++ 
  Dr08041.1 24 GYLGVRRRQ-SGCYAAVITNPYT---KKRHWLGTFDTPEEAALAYDT 66
               799***888.8*********865...5******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MDIPDLQCIR PSRHQRRRSK GSGGYLGVRR RQSGCYAAVI TNPYTKKRHW LGTFDTPEEA  60
ALAYDTSSIT FSGIDRAQTN FSYMLPPMPS PSPPIPPSPP PPSSPLPPPP SPSLEEKKEY  120
CFEYNFDISD HDNDWINITT ILQSFGQSNA FPSSLIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.12e-20ERF family protein