PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08077.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 170aa    MW: 19199.9 Da    PI: 10.11
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08077.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-19656155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
               ++++GVr+++ +g+WvAeIr+p        +r++lg+f tae+Aa+a+++a+  + g
  Dr08077.1  6 KKFRGVRQRH-WGSWVAEIRHP-----LmkRRVWLGTFETAEDAARAYDEAAVIMSG 56
               59*******9.**********7.....335*********************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MQVQSKKFRG VRQRHWGSWV AEIRHPLMKR RVWLGTFETA EDAARAYDEA AVIMSGHNAK  60
TNFPVSERSS RALSETLSEK LRRCCKAPAP SLTCLRLDTD KAHIGVWQKR AGSRAGSNWV  120
LNAELGKKVV SSSAEKTTTS SQDHQEMDIA LQMIEELLTV SYELPIFNQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-62ERF family protein