PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08175.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 186aa    MW: 21346.7 Da    PI: 8.6486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08175.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08961554
               HHHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-.STCHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPkas..kapskK.lsKaeiLekAveYIksL 54
                +  E++RR +++    eL +l+P+    + +sk   s    L +A +YIk+L
  Dr08175.1  9 RKVLEKKRRIQMKALCLELNSLIPNENkdSSSSKSsSSQLHLLDQAAKYIKEL 61
               5789*********************5557444444589999**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MVPLMKVERK VLEKKRRIQM KALCLELNSL IPNENKDSSS SKSSSSQLHL LDQAAKYIKE  60
LRERVDTLKE MKKIKINNNN NNNNVNSNDD EEMPVIQVKK VDSNLEVVLV SKLNKQVMFH  120
EVIRVLGEEG AEINNASFSI VGDKIFHTIH SQVNCSGMDF NCPAMLERLQ ELVHRRDALC  180
SRKMQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-18bHLH family protein