PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08241.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family NAC
Protein Properties Length: 201aa    MW: 23233.7 Da    PI: 9.5082
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08241.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1553.3e-48141381128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                lppGfrFhPtdeelv++yLk+k+ g +l+   +i+e+d+ +++PwdLp      e+e yfF  r+ ky+tg+r+nr+t sgyWkatg+dk+v+ + ++++
  Dr08241.1  14 LPPGFRFHPTDEELVDQYLKRKALGLTLPS-FIIPEIDLSEHDPWDLPGP---MEQEKYFFNLREAKYRTGSRNNRKTISGYWKATGRDKPVVISkNNQV 109
                79*************************999.67**************954...46799*********************************998758888 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg+kk+Lvfykg+  +g+kt W+mheyrl
  Dr08241.1 110 VGMKKVLVFYKGKPLHGSKTIWIMHEYRL 138
                ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MENSSFCQNR IVRLPPGFRF HPTDEELVDQ YLKRKALGLT LPSFIIPEID LSEHDPWDLP  60
GPMEQEKYFF NLREAKYRTG SRNNRKTISG YWKATGRDKP VVISKNNQVV GMKKVLVFYK  120
GKPLHGSKTI WIMHEYRLNS GLIDNMNSYD WVLCRIFMKK RATKMEAKSY IDFVRPCSSP  180
ESSCVTDVGG DLDDTSSRNI A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-74NAC family protein