PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08275.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 237aa    MW: 25906.5 Da    PI: 6.5279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08275.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.3e-2169118255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a+++++g
  Dr08275.1  69 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEGAAMAYDEAALRFKG 118
                7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MMFPSNYSSA SADQDVSAMV SALSHVIRTN QTAGQGSGDD AWLMNAGNPA SSLPISSAND  60
EQGNVRRRHY RGVRQRPWGK WAAEIRDPKK AARVWLGTFD TAEGAAMAYD EAALRFKGTK  120
AKLNFPERVQ GRTDIGFLVS RGVPERAPAV EQVIQPPTSS YPDLLQYAQI LQSSRDEDMH  180
NVASELYAGR DPYLMGYPTQ TSPASVSSSS QEYIDFSSSS ASSSSWSYGD HQRGKDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-29ERF family protein