PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08290.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 246aa    MW: 26979.6 Da    PI: 5.0796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-184394156
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               ++y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a+++l+g+
  Dr08290.1 43 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 94
               5799******.**********843...4*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDLSFFFSSS TSSTPAPQEK KSKRKQQDNG NTSTNATAVA SGTRYLGVRR RPWGRYAAEI  60
RDPATKERHW LGTFDTAEEA AVAYDRAARS LRGARARTNF AFPDLPPGSS LTPFLSPDIT  120
AHQTTLLPPY FTGTMQQDST HSHCVHVHQQ SNHLANNNDL VVAEQEAYIP SGVVPEVAIN  180
TPECTSETVA QEMSWFDAEE VNACAWSGAG YFEEGYVHSP LFGPMPTVDE ASPNDGFQLG  240
GSSYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.19e-31ERF family protein