PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08725.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 239aa    MW: 27312.7 Da    PI: 6.7974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08725.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-183281255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+++e+Aa+a++ a+++l+g
  Dr08725.1 32 RFVGVRQRP-SGRWVAEIKDSS---QHVRLWLGTFDSPEDAARAYDDAARALRG 81
               589******.7*********42...35*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MAQLDISHAS TTTKNTNQHH CNPSTTTTAC RRFVGVRQRP SGRWVAEIKD SSQHVRLWLG  60
TFDSPEDAAR AYDDAARALR GDNARTNFSP ATNFSGDHAF SQLRSKLSKN IMQHAKISSL  120
HHQHHQYFMP GETRVSDQFT FASIFHHESR DFHRFFVDEN EVQPSFVVPD SVEINGHEHF  180
GLMRKKRSRD DDGFICGSND INDDDDDDNN NNNNNNNNKR FKVSSSFIVP PSFNVFNEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-17ERF family protein