PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08737.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HD-ZIP
Protein Properties Length: 753aa    MW: 82177.8 Da    PI: 6.7041
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08737.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.43.9e-2181136156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                r++ +++t++q++eLe+lF+++++p++++r eL+k+l L+ rqVk+WFqNrR+++k
  Dr08737.1  81 RKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLESRQVKFWFQNRRTQMK 136
                789999***********************************************999 PP
2START187.28.7e-592664891206
                HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
      START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                ela+ a++elvk+a+ eep+W  s      e +n de+ q f++  +     + +ea+r++g+v+ ++  lve+l+d   +W  +++    +a++++ is
  Dr08737.1 266 ELALGAMDELVKMAQMEEPLWLPSLdcgvkEALNFDEYHQVFPRCIGmkpsgFVSEASRETGMVIINSLALVETLMDAT-RWADMFPgiiaRAAITDIIS 364
                57899*************************************9998899999***************************.******************** PP

                TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
      START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                sg      galqlm aelq+lsplvp R++ f+R+++q+ +g w++vdvS+d  ++   ++s+v +++lpSg+l+++++ng++kvtwveh+++++  +h 
  Dr08737.1 365 SGmggtrnGALQLMRAELQVLSPLVPiREVNFLRFCKQHAEGIWAVVDVSIDGIRES--NPSSVSCRRLPSGCLVQDMPNGYCKVTWVEHAEYDETRVHR 462
                ****************************************************99996..579************************************** PP

                HHHHHHHHHHHHHHHHHHHHTXXXXXX CS
      START 180 llrslvksglaegaktwvatlqrqcek 206
                l+r l++sg+ +ga++w+atlqrqce+
  Dr08737.1 463 LYRGLLQSGMGFGAQRWLATLQRQCEC 489
                *************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 753 aa     Download sequence    
MAAAGAGGNV SQPHHRSFTS SALSLALRTN SERNPMAAIG AAAGALDSIN VKDDEIESRS  60
GSDNLEGNSG DDLDQDNPRK RKRYHRHTPQ QIQELEALFK ECPHPDEKQR LELSKRLCLE  120
SRQVKFWFQN RRTQMKTQIE RHENTILRQE NDKLRAENMS MREAMRNPIC SNCGSPAMIG  180
ESSLEEQHLR IENARLKEEL DRVCTLAGKF LGRPVSSTSG PNASLELGVG NNGFAGLNPV  240
AALPEFTSVV SSPRIDRSIE RSMFLELALG AMDELVKMAQ MEEPLWLPSL DCGVKEALNF  300
DEYHQVFPRC IGMKPSGFVS EASRETGMVI INSLALVETL MDATRWADMF PGIIARAAIT  360
DIISSGMGGT RNGALQLMRA ELQVLSPLVP IREVNFLRFC KQHAEGIWAV VDVSIDGIRE  420
SNPSSVSCRR LPSGCLVQDM PNGYCKVTWV EHAEYDETRV HRLYRGLLQS GMGFGAQRWL  480
ATLQRQCECL AILMSSSIIS RDNSAITPSG RRSMLKLAQR MTANFCAGIC TSSMHKWSKL  540
CAPGVGEDVR VLTRQSLDDP GEPPGVVLSA ATSVWLAASP HRVFDFLRDE RIRSEWDILS  600
NGGPMQEMAH IAKGHDNGNA VSLLRAATGG TNQSGMLILQ ETCMDASGSM VVYAPVDIPA  660
MHVVMTGGDS TYVALLPSGF IIIPDSPRNG NATARSGSPT VRGGNAGCLL TVAFQILVNS  720
LPTAKLTVES VETVNNLIAC TVQKIKAAVQ CES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein