PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr08977.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

Nin-like

Protein Properties

Length: 984aa MW: 108568 Da PI: 7.5792

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr08977.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.2	9.2e-30	606	657	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Dr08977.1 606 AEKNISLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 657 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 984 aa Download sequence
MKGRLLFSLS PYLFITRRLG IPLSSRSRSW SLDCGDWKRV ASFGSSLSRM EGYAPANGGN 60 GSFTPEDPFS LSALMNFDFT ELCSPSASAD QAFNSFWASF ASTNASSAAM PAVESPVNSA 120 VSRTQKIDFQ FGCSSNSPEV MNLGMDRSGG CLESDGDPIS KSRSDIVPRC LPNFCLSEKM 180 LKALSFLKES SSGGILAQVW MPIKHGDDFV LSTSEQPYLL DKILAGYREV SRTYTFSARE 240 APGQLLGLPG RVFMTEMPEW TSNVVYYKKF EYLRVDHAVN HSVRGLLAVP VFDPTKRSCS 300 AVLELVSTNE KPDFDAEMDT VCHALMAVDL RTVKVQRSLK THQQNLSKSQ KCAFAEIFDV 360 LRAVCYAHML PLALTWIPYS CDDANMDSCS RTSCEDENSG FRKKSMLCVQ SSACYVNDTH 420 LEGFLHVCAD QHLERGQGIA GKALLSNHPF FSPDVKGYDI RDYPLAHHAR KYGLQAAVAI 480 RLRSTYTGND DYILEFFLPV NCGGSAEQQL LLNNLSRTMQ RICRSLRTVS DAEIVEADGL 540 GKGKESGPSS SSADVSSKNL RQIDSDTELT NFEIQNMGSD EWGEDGPHDQ MKPVPVRQLE 600 KKRSTAEKNI SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQHGISRWP SRKINKVNRS 660 LKKIQNVINS VQGVEGALKY DPATGSLVAA VSPSKKPSSL SVGSTDQDLM PVSFTHHIDS 720 EQIHGKMEHN RYFSGNSPGQ LDHLLEQKSK PDDACVPLLN CFPEHKPIPF NGEVAQQGKV 780 NLTTSWGSYT KNDPRGSDSA KMRNNRSADR KSGLSLEVRD LSRSSVSLAA ADEMAMKIDV 840 NHSLKERNHQ SSSGMTDSTS DSASSCRSFK KKSKRKPVSN GIGVAITMKA TYKEDTVRFK 900 FSQSMGYHYL LDEIGKRFKL VIGTFQLKYM DDEDEWVMLS NDSDLQECAE VLESMGSNSV 960 KLLVRDISHA VGSSTSSNCL LTET

Sequence ? help Back to Top

Protein Sequence Length: 984 aa Download sequence

MKGRLLFSLS PYLFITRRLG IPLSSRSRSW SLDCGDWKRV ASFGSSLSRM EGYAPANGGN  60
GSFTPEDPFS LSALMNFDFT ELCSPSASAD QAFNSFWASF ASTNASSAAM PAVESPVNSA  120
VSRTQKIDFQ FGCSSNSPEV MNLGMDRSGG CLESDGDPIS KSRSDIVPRC LPNFCLSEKM  180
LKALSFLKES SSGGILAQVW MPIKHGDDFV LSTSEQPYLL DKILAGYREV SRTYTFSARE  240
APGQLLGLPG RVFMTEMPEW TSNVVYYKKF EYLRVDHAVN HSVRGLLAVP VFDPTKRSCS  300
AVLELVSTNE KPDFDAEMDT VCHALMAVDL RTVKVQRSLK THQQNLSKSQ KCAFAEIFDV  360
LRAVCYAHML PLALTWIPYS CDDANMDSCS RTSCEDENSG FRKKSMLCVQ SSACYVNDTH  420
LEGFLHVCAD QHLERGQGIA GKALLSNHPF FSPDVKGYDI RDYPLAHHAR KYGLQAAVAI  480
RLRSTYTGND DYILEFFLPV NCGGSAEQQL LLNNLSRTMQ RICRSLRTVS DAEIVEADGL  540
GKGKESGPSS SSADVSSKNL RQIDSDTELT NFEIQNMGSD EWGEDGPHDQ MKPVPVRQLE  600
KKRSTAEKNI SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQHGISRWP SRKINKVNRS  660
LKKIQNVINS VQGVEGALKY DPATGSLVAA VSPSKKPSSL SVGSTDQDLM PVSFTHHIDS  720
EQIHGKMEHN RYFSGNSPGQ LDHLLEQKSK PDDACVPLLN CFPEHKPIPF NGEVAQQGKV  780
NLTTSWGSYT KNDPRGSDSA KMRNNRSADR KSGLSLEVRD LSRSSVSLAA ADEMAMKIDV  840
NHSLKERNHQ SSSGMTDSTS DSASSCRSFK KKSKRKPVSN GIGVAITMKA TYKEDTVRFK  900
FSQSMGYHYL LDEIGKRFKL VIGTFQLKYM DDEDEWVMLS NDSDLQECAE VLESMGSNSV  960
KLLVRDISHA VGSSTSSNCL LTET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	Dr08977.1