PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr08996.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 143aa MW: 15979.3 Da PI: 9.2533

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr08996.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.3	7.6e-05	41	75	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +i +++ L++l+ + +K + a++L+ A+eYI+ L Dr08996.1 41 KIGERMVALKQLVSPF-----GKSDTASVLQDATEYIRFL 75 6777888899999887.....89***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MLMMNKVCKK KGGRCSDFFF KDDNSRSVFG KKLNNVKGKD KIGERMVALK QLVSPFGKSD 60 TASVLQDATE YIRFLHDQIQ VLLSPYIGTK MINNVILHHQ NQESSASEEH LXGLCLMPIE 120 SSLRMASTNG ADIWAPITAT KEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	4e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr08996.1