PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr08997.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

DBB

Protein Properties

Length: 240aa MW: 26357.9 Da PI: 4.7661

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr08997.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24	7.8e-08	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e+H H++ Dr08997.1 4 QCDACEKSPATVICCADEAALCASCDVEIHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	29.2	1.9e-09	53	85	2	34
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek++ +fC +++ l+C++C + +H Dr08997.1 53 KLPRCDICQEKPAFIFCVEDRALFCRECDEPIH 85 789***************************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKIQCDACEK SPATVICCAD EAALCASCDV EIHAANKLAS KHQRLLLQCL SNKLPRCDIC 60 QEKPAFIFCV EDRALFCREC DEPIHVAGSL SGNHQRFLAT GIRVALSSGC NNDINKECFE 120 PPNRHAPLQA PNNLSTQQTP SAFTQSAWAV DEFLQLSDYE SADKKETPAG IGELEWFTDI 180 GLFQGQGHKG MLSAAEVPEL VIPQASNAPS YRPTKSNMPL KKLRIELSDD EEYFTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	4e-95	DBB family protein

Link Out ? help Back to Top
Ensembl	Dr08997.1