PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09022.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

FAR1

Protein Properties

Length: 204aa MW: 23373 Da PI: 5.0133

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09022.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.7	1.1e-09	136	181	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +Y +YAk+ GF vrk + ++s+ ++ it+r+fvC ke + ++k+ Dr09022.1 136 YYLDYAKSKGFGVRKGHVYSSSISQIITCRHFVCDKEEAKCMSDKR 181 8***********************************9988777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MNAQLIGKYS SLKSLSLSSS GSTIVLRSGQ SLHHSSAHLI AIFAKDIMEN IADEIYRNNN 60 STFEDIEIDI NELGLYEESE GHVTQGIDSH QVEDMHELAT QDNQEMAISP QSRDERDVRI 120 PFVGMEFEDE NEAFRYYLDY AKSKGFGVRK GHVYSSSISQ IITCRHFVCD KEEAKCMSDK 180 RQLGKIVQRR RVEYGEWNMD HKDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-11	FAR1 family protein

Link Out ? help Back to Top
Ensembl	Dr09022.1