PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09071.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 485aa    MW: 54258 Da    PI: 6.3451
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09071.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.82.7e-132494801374
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                l++lLl+cA++v++g+l +a+++L+++s lasp+gd+mqR+a++fteALa+r++rs+++ly++l+ ++t     +++laa++ f++++P++k++ l++Nq
  Dr09071.1  49 LIHLLLNCANHVAAGSLDQANSCLEQISMLASPTGDTMQRIASHFTEALARRVLRSWPGLYRSLNLTTTG---IADSLAARRHFFDLCPFIKVACLICNQ 145
                689***************************************************************9998...9************************** PP

       GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                aI+ea+ege+ vHiiD+    ++QW+aLlqaL +Rpegpp+lRiTg+++    +ke l  tg rL + Ae+l++pf+f++ v  ++e+l++e+Lrvk+gE
  Dr09071.1 146 AIMEAMEGEKVVHIIDLHTIDPIQWVALLQALRQRPEGPPHLRITGISD----HKELLDVTGARLCEEAEKLDIPFQFHP-VLAKVENLDVESLRVKTGE 240
                *************************************************....9**************************.7999*************** PP

       GRAS 201 alaVnlvlqlhrll......................................................................desvsleserdevLkl 230
                a+aV++ +qlh ll                                                                      + s     + +++L  
  Dr09071.1 241 AVAVCSLFQLHCLLasdddigngfrkfhsxpspaathsnnkntvqlhkimqltqgtlgellekdimanaknayspdsasspfalAPSP----KMERFLAS 336
                ***************************************************************************9986554444444....4566**** PP

       GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpls 330
                v+sl Pkv+ v+eqe++hn+++  erf+eal++y+alfd+le+++pr s er+kvE++++g+ei+n++aceg er+erhe+l kW +rl+ aGF  vpls
  Dr09071.1 337 VWSLTPKVMLVTEQESNHNGATVNERFVEALNFYAALFDCLESTVPRISPERMKVEKMMFGEEIKNIIACEGGERKERHEKLDKWVQRLDIAGFCRVPLS 436
                **************************************************************************************************** PP

       GRAS 331 ekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                +    qa++ l+ ++ dgy+++ee+g + ++W+dr+L+svSaWr
  Dr09071.1 437 YLPLLQADRFLQSYGCDGYKLKEENGYIQICWQDRALFSVSAWR 480
                *******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MVQDEAAASA SSSVISSPLQ FFSSMSISPG SPYTPWVQEL KSDERGLYLI HLLLNCANHV  60
AAGSLDQANS CLEQISMLAS PTGDTMQRIA SHFTEALARR VLRSWPGLYR SLNLTTTGIA  120
DSLAARRHFF DLCPFIKVAC LICNQAIMEA MEGEKVVHII DLHTIDPIQW VALLQALRQR  180
PEGPPHLRIT GISDHKELLD VTGARLCEEA EKLDIPFQFH PVLAKVENLD VESLRVKTGE  240
AVAVCSLFQL HCLLASDDDI GNGFRKFHSX PSPAATHSNN KNTVQLHKIM QLTQGTLGEL  300
LEKDIMANAK NAYSPDSASS PFALAPSPKM ERFLASVWSL TPKVMLVTEQ ESNHNGATVN  360
ERFVEALNFY AALFDCLEST VPRISPERMK VEKMMFGEEI KNIIACEGGE RKERHEKLDK  420
WVQRLDIAGF CRVPLSYLPL LQADRFLQSY GCDGYKLKEE NGYIQICWQD RALFSVSAWR  480
CRRFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein