PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09679.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 241aa MW: 26599.7 Da PI: 6.1429

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09679.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.3	1.8e-10	83	130	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +K++K +iL Av+ + +L Dr09679.1 83 SKACREKMRRDRLNDKFVELGSILDPG---KPPKMDKXAILSDAVHMVTQL 130 5678********************9...99************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MSSFENSNWA FDPSLIGDIP VHVVDFGAGD SGYFWTPQGL NVPPNASILF SLQVDGSQVX 60 SDGPKESSSS KRARTESSGG PSSKACREKM RRDRLNDKFV ELGSILDPGK PPKMDKXAIL 120 SDAVHMVTQL RTDVQKLKDS NEKLHEKIKE LKTEKNELRD EKQRLKAEKE SLEQQVKLLN 180 ATPSFVPHPP VIPTPYVAQG QASGQKLMMP VIGYPGFPMW QFMPPADVDT SQDVESCPPV 240 A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	5e-80	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr09679.1