PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09680.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

bHLH

Protein Properties

Length: 176aa MW: 19495.7 Da PI: 7.5098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33	1.1e-10	83	130	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +K++K +iL Av+ + +L Dr09680.1 83 SKACREKMRRDRLNDKFVELGSILDPG---KPPKMDKXAILSDAVHMVTQL 130 5678********************9...99************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MSSFENSNWA FDPSLIGDIP VHVVDFGAGD SGYFWTPQGL NVPPNASILF SLQVDGSQVX 60 SDGPKESSSS KRARTESSGG PSSKACREKM RRDRLNDKFV ELGSILDPGK PPKMDKXAIL 120 SDAVHMVTQL RTDVQKLKDS NEKLHEKIKE LKVSIPVYVV SLVLNLLKFC FEDNKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	8e-36	bHLH family protein

Link Out ? help Back to Top
Ensembl	Dr09680.1