PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09684.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 395aa    MW: 43787.2 Da    PI: 9.7506
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09684.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.4e-05159181223
                EETTTTEEESSHHHHHHHHHH.T CS
    zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                +C++Cgk F  +++L+ H  + H
  Dr09684.1 159 RCHKCGKDFGKWESLEAHHLSnH 181
                8*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MSTVWMSLKR SLQCKSEXCD VYDPKARLHL NTILTRKAGR SGCSRSIANL KDVIHGSKKR  60
LERPPSCSPR SIGSSEFLNP ITHEVVLNNS NYELKITGFG AFHEVDNGVN STYVGTLKPG  120
TPGPGGHHHG FRYNPSPRAA AIRTPSKRTS SHETVAIMRC HKCGKDFGKW ESLEAHHLSN  180
HAVTELLEGD SSRKIVEIIC RTSWLKNENS CGRIERVLKV HNMQKTLGHF EEHREMVKNR  240
ASKLPKKHPR CLADGNELLR FYGTTIMCSL GMNGSSSLCA SEKCNVCRII RHGFSTKKDL  300
KKGGIGVFTT ATSGRAFESI DELHEAHCVG VRKALLVCRV IAGRVHKPLD SYQELARQSG  360
FDSVAGKVGL YANIEELYLL NPLALLPCFV VICKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-146C2H2 family protein