PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09685.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 557aa    MW: 62598.4 Da    PI: 6.0423
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09685.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.32.5e-1301875561373
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                +++lL++cAea+s+++ e  ++l+++ +  +s +g+p+qRl ay+ e+L ar  +s++++y+al++++ +   s+e l++++++++++P++kf++++aN 
  Dr09685.1 187 MKQLLVKCAEALSENKIEDFETLVEKARGVVSITGEPIQRLGAYIIEGLVARHESSGTNIYQALKCRAPE---SKELLSYMRILYDICPYFKFGYMAANG 283
                579******************************************************************9...9************************** PP

       GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                aI ea+ +e+r+HiiDf+i qG+QW++L+qaLa+Rp+gpp++RiTg+++p s+  + e+l+ +g+ L+++ +++++p+efn+l +    +++ ++L+++p
  Dr09685.1 284 AIAEALRNENRIHIIDFQIAQGTQWITLIQALAARPGGPPHVRITGIDDPVSEyaRGENLQLVGKMLSEMSKKFNIPLEFNAL-SVYGPNVTRDMLDIRP 382
                **************************************************999999**************************5.88899*********** PP

       GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                +EalaVn+ lqlh+++desv+++++rd +L++vk+lsPkv ++ve+e++ n+++Fl+rf+e+l+yysa+f+s++a+l+r+s+eri+vE+++l+++ivn++
  Dr09685.1 383 DEALAVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEHESNSNTTPFLTRFMETLDYYSAMFESIDATLARDSKERISVEQHCLAKDIVNMI 482
                **************************************************************************************************** PP

       GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                aceg+er+er e l+kWr+rl++aGFkp+pls+++++ +++ll+ ++ d y++ e++g+++lgWk+r+L+s+SaW
  Dr09685.1 483 ACEGKERVERYELLGKWRSRLTMAGFKPYPLSSYVNSVIRTLLACYS-DKYTLVEKDGAMLLGWKNRSLISASAW 556
                ********************************************999.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MQQFFGSEFT DADISYNHSS VITPAYSEWP VDSIKFNLGI SPNSPLSSQF DCETLSARSN  60
SQEQYSPSYY SGNSFRQAEI SFQDGIQGHH SSAYISSGQS IRHALQELET VLMAPDSDEX  120
TTSTNTELDE TKIAQVPKSR SRTSSQVSCV QVSNPHHQYP LTRYQGSYVN RPEKRLKEVA  180
DIPLNNMKQL LVKCAEALSE NKIEDFETLV EKARGVVSIT GEPIQRLGAY IIEGLVARHE  240
SSGTNIYQAL KCRAPESKEL LSYMRILYDI CPYFKFGYMA ANGAIAEALR NENRIHIIDF  300
QIAQGTQWIT LIQALAARPG GPPHVRITGI DDPVSEYARG ENLQLVGKML SEMSKKFNIP  360
LEFNALSVYG PNVTRDMLDI RPDEALAVNF TLQLHHTPDE SVDVNNPRDG LLRMVKGLSP  420
KVTTLVEHES NSNTTPFLTR FMETLDYYSA MFESIDATLA RDSKERISVE QHCLAKDIVN  480
MIACEGKERV ERYELLGKWR SRLTMAGFKP YPLSSYVNSV IRTLLACYSD KYTLVEKDGA  540
MLLGWKNRSL ISASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-179GRAS family protein