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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr09688.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | GRAS | ||||||||
| Protein Properties | Length: 489aa MW: 54679.5 Da PI: 7.1897 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 294.9 | 2.1e-90 | 46 | 442 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfshltaN 99
++lLl+cA a++s+d +laq++++ l+++as++gdp+qRl++ f++A r +r +++ ++ + +++ +ss+ ++++++ +++++P+++f++ + N
Dr09688.1 46 EKLLLHCACALESSDVTLAQQVMWVLNNIASSNGDPNQRLTSWFLRAFIFRASRLCPTAMSFQSNTTSL--TSSRPMSVTEFagYVDLTPWHRFGFCASN 143
689***************************************************877777654444443..3555555555566**************** PP
GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl............... 181
aI++a+eg+++vHi+D++i++++QWp+L++aLa+Rpeg+p lRiT+ + ++ + ++ee+g rLa+fA++ +vpfefn+l
Dr09688.1 144 GAIYKAIEGHSKVHILDLSITHCMQWPTLIDALAKRPEGAPFLRITVPSTRPPVpplLNVSIEEVGLRLANFARSRDVPFEFNALkcsdsnapnafenli 243
***********************************************9997777889999*****************************99999998888 PP
GRAS 182 .....vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
+ l++l+++++ ++++E+l+Vn++ l +l++es++ +s ++d +L+l+++l+P++++v+++ +d++s+s+++r + +++y + fd+le
Dr09688.1 244 ssfyqELTVLNQLSPSSIVLREDETLIVNCQSWLRYLPEESQEANSckpsTKDGFLQLIRGLNPHIITVTDEYCDLDSPSLAARTMACFNYLWIPFDTLE 343
7775545567788999999999******************99999877778999********************************************** PP
GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
+ lp++s +r+ +E+ +g++i+n++ ega+r+er e+ ++ +r+++a F++v++sek++k++k +l +++ g+ +++e++ lvl+Wk+++ v+++a
Dr09688.1 344 TFLPKDSPQRMDYEAD-IGQKIENIIGFEGAQRIERPESGARLARRMKKANFSSVSFSEKTVKEVKFILDEHA-SGWGMKKEEDMLVLTWKGHSSVFTTA 441
****************.********************************************************.889999******************** PP
GRAS 373 W 373
W
Dr09688.1 442 W 442
* PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 489 aa Download sequence |
MKAELRSNST KISLPNPNLF QNQRGSSSLS GTLRGTLGSL DGACIEKLLL HCACALESSD 60 VTLAQQVMWV LNNIASSNGD PNQRLTSWFL RAFIFRASRL CPTAMSFQSN TTSLTSSRPM 120 SVTEFAGYVD LTPWHRFGFC ASNGAIYKAI EGHSKVHILD LSITHCMQWP TLIDALAKRP 180 EGAPFLRITV PSTRPPVPPL LNVSIEEVGL RLANFARSRD VPFEFNALKC SDSNAPNAFE 240 NLISSFYQEL TVLNQLSPSS IVLREDETLI VNCQSWLRYL PEESQEANSC KPSTKDGFLQ 300 LIRGLNPHII TVTDEYCDLD SPSLAARTMA CFNYLWIPFD TLETFLPKDS PQRMDYEADI 360 GQKIENIIGF EGAQRIERPE SGARLARRMK KANFSSVSFS EKTVKEVKFI LDEHASGWGM 420 KKEEDMLVLT WKGHSSVFTT AWVPNGFPKA KRAKLEELMR KIKRSLEFVA TREVELNAPP 480 EHISSTGEV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G49950.1 | 1e-126 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | Dr09688.1 |




