PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09728.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NF-YB

Protein Properties

Length: 194aa MW: 21232.9 Da PI: 6.6731

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09728.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	161.8	9.9e-51	24	118	2	96
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 ++ dr+lPianvsr+mk+ lP+nakisk+ake vqecvsefisf+t+easdkc+rekrkt+ng+dllwa++tlGfe+yv pl++yl+ky+++ e Dr09728.1 24 KDADRLLPIANVSRLMKRSLPTNAKISKEAKEAVQECVSEFISFITGEASDKCRREKRKTVNGEDLLWAMTTLGFENYVYPLELYLNKYKDCVHE 118 689***************************************************************************************97655 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MKARNTHQLS SSQSPLFDAE PSLKDADRLL PIANVSRLMK RSLPTNAKIS KEAKEAVQEC 60 VSEFISFITG EASDKCRREK RKTVNGEDLL WAMTTLGFEN YVYPLELYLN KYKDCVHEGE 120 VVEEKKKSFI GKQGEASASS ERSFLCFNAG VDAPAPVKFM EFGVERTVEG GHAANGSGSG 180 GGDAWSLPSH SHGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	2e-52	NF-YB family protein

Link Out ? help Back to Top
Ensembl	Dr09728.1