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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dr09795.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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| Family | MYB | ||||||||
| Protein Properties | Length: 316aa MW: 36217.2 Da PI: 6.1637 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 56.1 | 8.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++lvd+++ G g+W+t ++ g+ R++k+c++rw +yl
Dr09795.1 14 KGPWTSEEDQKLVDYIHNNGEGRWRTLPKNAGLSRCGKSCRLRWTNYL 61
79********************************************97 PP
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| 2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rgr++ +E+e +++++ lG++ W++Ia+ ++ gRt++++k++w+++
Dr09795.1 67 RGRFSFQEEEAIIQLHSVLGNK-WSAIAAQLP-GRTDNEIKNYWNTH 111
89********************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 316 aa Download sequence |
MGRTPCCDKN GLKKGPWTSE EDQKLVDYIH NNGEGRWRTL PKNAGLSRCG KSCRLRWTNY 60 LRPDIKRGRF SFQEEEAIIQ LHSVLGNKWS AIAAQLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHRPRF DLLNLSSLLN PAVYTTTTSQ FQAPKLLQNQ ALSDSDLFKL TTNYLLSSSH 180 CQNSGLSGQE EIQQLIQPNY IQNAVQFDQD DQFMQMNNDN YCNLYPNSSV QYEEGVVQYD 240 RLQQYYNYLS SSLCGENTII NFDAASEFSA TTSSLTNLNS LATQSNSNTE DERDSHCSER 300 YRMTGSHEVL DVSDFM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G21440.1 | 1e-93 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | Dr09795.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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