PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09861.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 156aa MW: 18455.1 Da PI: 9.7933

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09861.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.2e-32	77	135	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fpr+YYrCt+ gC+vkk+v+r +ed+ vv++tYeg H+h+ Dr09861.1 77 LDDGYRWRKYGQKAVKNNRFPRNYYRCTHGGCSVKKQVQRLTEDEGVVVTTYEGVHTHP 135 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MENFPLVLEQ HTQPSSXHHY TPNMVSNSQL FNQIQSTSYG EHGEELQEKK NXKKKGIEKK 60 ERSHRYAFRT RSQVDILDDG YRWRKYGQKA VKNNRFPRNY YRCTHGGCSV KKQVQRLTED 120 EGVVVTTYEG VHTHPIQKSS DNFEQILQQL QIYRSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	7e-55	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr09861.1