PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10006.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 937aa MW: 105647 Da PI: 6.8158

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10006.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159	1.9e-49	512	639	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lp+Gf F Ptdeelv++yLkkk g+k++ e+i+evdiyk+ePwdLp+ +v +++++w+fF++rd+ky++g r+nrat++gyWk+tgkd++++s k++ Dr10006.1 512 LPRGFGFYPTDEELVSHYLKKKSLGQKIDH-EIIPEVDIYKFEPWDLPAkcHVPTRDSKWHFFTTRDRKYPNGFRSNRATEAGYWKSTGKDRRIKS-KHR 609 699***********************99.89***********5346666899**********************************.899 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvf+kgr p g++tdW+mhey l Dr10006.1 610 VVGTKKTLVFHKGRPPLGKRTDWIMHEYYL 639 9*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 937 aa Download sequence
MSNDDANARR ATAVXEYRKK LLHYRELESR VRTVRESLRN SKKEFAKTED DLKSLQSVGQ 60 IIGEVLRPLD NERLIVKASS GPRYVVGCRS KVDKEKLTAG TRVVLDMTTL TIMRALPREV 120 DPVVYNMLHE DPGNVSYSAV GGLSDQIREL RESIELPLMN PELFIRVGIK PPKGVLLYGP 180 PGTGKTLLAR AIASNIDANF LKVVSSAIID KYIGESARLI REMFGYARDH QPCIIFMDEI 240 DAIGGRRFSE GTSADREIQR TLMELLNQLD GFDQLGKVKM IMATNRPDVL DPALLRPGRL 300 DRKIEIPLPN EQSRMEILKI HAAGIAKHGE IDYEAVVKLA EGFNGADLRN VCTEAGMSAI 360 RAERDFVIQE DFMKVDQSLL NDELIKILAF KLLFTSLAVS VTGPSKRTRT SQERQHHHLI 420 FDLFSSLLSL ASSSSSSSSS RSSFCRRRSL VFICXLISFE LICIEVVCVF DAVLIVSCDQ 480 GLIVVENLLE ISRSVFVVLV LHEMEIMNVF SLPRGFGFYP TDEELVSHYL KKKSLGQKID 540 HEIIPEVDIY KFEPWDLPAK CHVPTRDSKW HFFTTRDRKY PNGFRSNRAT EAGYWKSTGK 600 DRRIKSKHRV VGTKKTLVFH KGRPPLGKRT DWIMHEYYLD EKEYKAAPGM KNSFVLCRVT 660 KRDGLVQEAE MSSKIGDCAD QPKGVTDLVV QGDVDDVEAW IKELYXPNFC TIHAITELKE 720 NDNLIAPKRE ADNPCSPPNI SEDSVHFPLE IDKTECFLEE DIPELDIDFF FGEYGAGVAL 780 DDILTPSEAA EHXGNPIHYN SLTSFNVVGR HGSDFICENA DNTKNTGNEE TGIQIRSRRP 840 GFSTTVTKER IRLQTHKMES RNGKTINGTV ECVNEDHXLE FKNGSDDPER PASIHPKKKS 900 YIKGLNFLFL AGVFALILYF LLHVAAPFSR ISSSSEL

Sequence ? help Back to Top

Protein Sequence Length: 937 aa Download sequence

MSNDDANARR ATAVXEYRKK LLHYRELESR VRTVRESLRN SKKEFAKTED DLKSLQSVGQ  60
IIGEVLRPLD NERLIVKASS GPRYVVGCRS KVDKEKLTAG TRVVLDMTTL TIMRALPREV  120
DPVVYNMLHE DPGNVSYSAV GGLSDQIREL RESIELPLMN PELFIRVGIK PPKGVLLYGP  180
PGTGKTLLAR AIASNIDANF LKVVSSAIID KYIGESARLI REMFGYARDH QPCIIFMDEI  240
DAIGGRRFSE GTSADREIQR TLMELLNQLD GFDQLGKVKM IMATNRPDVL DPALLRPGRL  300
DRKIEIPLPN EQSRMEILKI HAAGIAKHGE IDYEAVVKLA EGFNGADLRN VCTEAGMSAI  360
RAERDFVIQE DFMKVDQSLL NDELIKILAF KLLFTSLAVS VTGPSKRTRT SQERQHHHLI  420
FDLFSSLLSL ASSSSSSSSS RSSFCRRRSL VFICXLISFE LICIEVVCVF DAVLIVSCDQ  480
GLIVVENLLE ISRSVFVVLV LHEMEIMNVF SLPRGFGFYP TDEELVSHYL KKKSLGQKID  540
HEIIPEVDIY KFEPWDLPAK CHVPTRDSKW HFFTTRDRKY PNGFRSNRAT EAGYWKSTGK  600
DRRIKSKHRV VGTKKTLVFH KGRPPLGKRT DWIMHEYYLD EKEYKAAPGM KNSFVLCRVT  660
KRDGLVQEAE MSSKIGDCAD QPKGVTDLVV QGDVDDVEAW IKELYXPNFC TIHAITELKE  720
NDNLIAPKRE ADNPCSPPNI SEDSVHFPLE IDKTECFLEE DIPELDIDFF FGEYGAGVAL  780
DDILTPSEAA EHXGNPIHYN SLTSFNVVGR HGSDFICENA DNTKNTGNEE TGIQIRSRRP  840
GFSTTVTKER IRLQTHKMES RNGKTINGTV ECVNEDHXLE FKNGSDDPER PASIHPKKKS  900
YIKGLNFLFL AGVFALILYF LLHVAAPFSR ISSSSEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	5e-67	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr10006.1