PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10035.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB_related
Protein Properties Length: 97aa    MW: 11133.5 Da    PI: 9.577
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10035.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-071357345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WTt   + + +a + + ++   +W  +ar +  g++++++k ++ 
        Dr10035.1 13 SWTTKQNKMFERALAVFDKDtpdRWQNVARAVE-GKSAEEVKRHYE 57
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MASGSLSRSS GSSWTTKQNK MFERALAVFD KDTPDRWQNV ARAVEGKSAE EVKRHYELLI  60
EDLNHIESGQ VPFPTYKSPA SSRVTNEEQR LRYMKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-38MYB_related family protein