PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10045.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family C2H2
Protein Properties Length: 315aa    MW: 35443.5 Da    PI: 7.7559
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10045.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000111437223
               EETTTTEEESSHHHHHHHHHH..T CS
    zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
               kC  C k ++r ++L+ H+r   H
  Dr10045.1 14 KCAACFKQYNRMEHLVEHMRIsfH 37
               6999****************8666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MESRPESSET QRNKCAACFK QYNRMEHLVE HMRISFHSAH EPNCGICQKH CRSFESLREH  60
LIGPLPKIEC AKIFSIRGCN LCLNLFDSSN ALRIHRGSCQ LSRIAPGLIH RMGRLNLQAS  120
TEIDTKARDP QVVALACKMV GGGSDGSLDI CARVCLIDED ENIIFHSYVK PQIPVTNYRG  180
GKARILVGHG LDHDLNCLGI EYPALLIRDT ANYPPLMKTS KLSNSLKYLT QAYLGYDIQT  240
GMQDPYEDCV AALRLYNRMR SQVHPPDYSS GSGEAQSRNN FASWKQRDLE KMTPEALLEI  300
SASDNYCWCL DSLSK