PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10161.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 889aa    MW: 97935.8 Da    PI: 4.7095
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10161.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.83.2e-1262676401373
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshlta 98 
                lv+lL++c+ea+s +++++++ +Larl ela+p+g+p++Rla+yfteALa r a+ +++++ + pp+e +++    ++ ++a++l+++vsPi+kf h+t 
  Dr10161.1 267 LVSLLTDCVEAISGSNHTAINYYLARLGELATPTGSPVHRLASYFTEALALRAAKLWPHIFFIAPPREIADQLvdDEDDATAFRLLNHVSPIPKFLHFTL 366
                6899****************************************************************99888666778899999*************** PP

       GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                N+ +l+ +eg++rvHiiDfdi+qGlQWp L+q+LasRp++p ++RiTg+g+    sk+ l+ tg rLa fAe+l++pfef++ v++rled++l++L+vk+
  Dr10161.1 367 NERLLRVFEGKDRVHIIDFDIKQGLQWPGLFQSLASRPNPPSHVRITGIGE----SKQDLQDTGARLAGFAEALHLPFEFHP-VVDRLEDVRLWMLHVKE 461
                ***************************************************....9**************************.7**************** PP

       GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                +E +aVn+vlqlh+ l ++   +    ++L l++s++P v+ v eqeadhn++++ +rf+++++yy+a+fdsl+ +lp +s +rik+E++ ++r+i+n+v
  Dr10161.1 462 REFVAVNCVLQLHKALYDENRAAL--MDLLGLIRSTNPAVLLVGEQEADHNEQRWETRFANSFKYYAAIFDSLDFSLPVDSPARIKIEEM-FARKIRNIV 558
                ****************77766665..89**************************************************************.********* PP

       GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.......sgslvlgWkdrpLvsvSaW 373
                aceg+er+erhet+ kWr+ le+ G++ + ++++++ q ++llr+++s+ y++++e        + l+l W d+pL++vSaW
  Dr10161.1 559 ACEGSERVERHETFTKWRRYLEDGGYRCIGFGQRETLQSRMLLRMYSSENYSIDKEdagddgdAAGLTLKWLDQPLYTVSAW 640
                ***********************************************999****77778877678899************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    
MLAGCSSALL TQRHRLRSDD AATAPLIQAC HFQLQDKMSA QQFNLPCSFS RKESARVSLS  60
LEKPADTRST CSFRQSSIAP TSASLVAQTT SWESRREVEG DEGFWDRGGK SLKRCYDRSS  120
SEDSTCFDRS KRKRTLGSEA CLVYGGGAGG AGGGEEFWFP RSINEPSFVG DEKVCFVPNA  180
TNALLGALGM EMVGEMEVGT SGAGALERSN PDSSSSSDTH GSSPKPNDDS SENESGNGAR  240
ISNPSGGVAR AATAAENNQT EQQSFELVSL LTDCVEAISG SNHTAINYYL ARLGELATPT  300
GSPVHRLASY FTEALALRAA KLWPHIFFIA PPREIADQLV DDEDDATAFR LLNHVSPIPK  360
FLHFTLNERL LRVFEGKDRV HIIDFDIKQG LQWPGLFQSL ASRPNPPSHV RITGIGESKQ  420
DLQDTGARLA GFAEALHLPF EFHPVVDRLE DVRLWMLHVK EREFVAVNCV LQLHKALYDE  480
NRAALMDLLG LIRSTNPAVL LVGEQEADHN EQRWETRFAN SFKYYAAIFD SLDFSLPVDS  540
PARIKIEEMF ARKIRNIVAC EGSERVERHE TFTKWRRYLE DGGYRCIGFG QRETLQSRML  600
LRMYSSENYS IDKEDAGDDG DAAGLTLKWL DQPLYTVSAW APLDIAGSSS TSQPGYVLLF  660
KGITMNTVDH EGVRMDVVLE TRGKQQQVDV HYMNAPVSCV VEEDFLPLPE VLQEQETVYE  720
SSQREANMAR ASSSSDTRSD PGHGQSSGEG SSSGTMNIEA QLAMDEALAR ELQEMEDDIA  780
GFSIGGITVT ESDISTNNSS SSAASGQNTS NASEQVERQD DVDPDNMTYE ELQSLGEAIG  840
TESRGLSDEL IGFLPSSTYK TGFFSRKEKQ ERARFAMKKY LVSQHGKDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein