PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10210.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 312aa    MW: 34825.2 Da    PI: 7.3609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.93.7e-08150197455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i  ++  L+ l+P +    +k   Ka +L + ++Y++sLq
  Dr10210.1 150 SHSLAERVRREKISARMKLLQGLVPGC----DKVTGKALMLDEIINYVQSLQ 197
                8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAASSYQLHH PFLLDTAYLS NTSMEIPLRN QDMATNYSSS SFQYFFAHDP MPEIIDNDAR  60
PHESCTSHNS STTSKTSDVE KKRKSSDLTC LSSIQSKESK SRSKKKANGG LKEVEEDKIS  120
KKEKKKKTCD QEPPEGYIHV RARRGQATDS HSLAERVRRE KISARMKLLQ GLVPGCDKVT  180
GKALMLDEII NYVQSLQNQV EFLSMKLASL NPILYNLGID FDGNINQLEK LEGQSQPLPT  240
VHPTNHIQLT AFEEATNNYR MMEASAPFLL HGEGPTAFSQ DNSNSLMQMS GQSTQGGGFL  300
TQLLSNSMLS FH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-51bHLH family protein