PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10371.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ARR-B
Protein Properties Length: 681aa    MW: 75411.8 Da    PI: 7.021
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10371.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.24.3e-29214267155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  Dr10371.1 214 KPRVVWSVELHRKFVAAVNQL-GIEKAVPKKILDLMNVEGLTRENVASHLQKYRL 267
                79*******************.********************************8 PP
2Myb_DNA-binding40.46.9e-13216266148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
        Dr10371.1 216 RVVWSVELHRKFVAAVNQLGIEkaVPKKILDLMNvEGLTRENVASHLQKYR 266
                      678***********************************************7 PP
3Response_reg76.87.8e-26261341109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ +++l+++l+k +y +v+ + ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++ + + + ++ Ga 
     Dr10371.1  26 VLAVDDDPTCLKVLENLLRKCNY-HVTITNQAITALKMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTKAVMKGISHGAC 120
                   799********************.***************888889*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel +
     Dr10371.1 121 DYLLKPVRIEELKN 134
                   ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    
MIVEEKRGVM GRESRPRDQF PVGMRVLAVD DDPTCLKVLE NLLRKCNYHV TITNQAITAL  60
KMLRENKDQF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDTKA VMKGISHGAC  120
DYLLKPVRIE ELKNIWQHVI RRRKIETRDH NNSDNGDDYQ KGQLSSSETG QGPAAGALVD  180
RNKLNRKRKD QDDEEEDDCE ENAHENDDPS SQKKPRVVWS VELHRKFVAA VNQLGIEKAV  240
PKKILDLMNV EGLTRENVAS HLQKYRLYLK RLSAVASQQA NLVAALRGRE HSYLPMASLD  300
GFRNYHAMPG SGQLPALTPF QSNGLLGRLN SPTGMGLHRI APSGVAPINH SYDNPSVPVN  360
DLRKLQGIXI PGNQNXNLLQ GVPTSLELDQ LQQNKTVQKA SNPITGGLSC GNSFSTLSSN  420
PLLVQAGDMH TKSVGFTNPL NSNPFDMGLG DSSHLPDLTR CNNTWPAAVX SDRNSXNTSH  480
MSICASNDDV SNNNMRNNIP PMISHVDNNP HDVLAGNVVV PPLHDPLMQS SIQFQARALC  540
GDIPMSVVED SKLLNFSRSG NSRQHWQGQK QDHHNSNIII SSSANSSLLN LHTNIPFVES  600
QTLKDGFCDK KMEMIMNPPP TNFGASYAPQ PHKINNXXND IQPKYKDGFM METQKFQGSF  660
NSNASNGLLD VVIKPVCACF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-130ARR-B family protein