PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10401.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family ERF
Protein Properties Length: 143aa    MW: 16049.7 Da    PI: 10.3797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10401.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-213383256
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
               +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g+
  Dr10401.1 33 HFRGVRKRP-WGRYAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARSLRGP 83
               69*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MALSDTLSIT NHQITAEDTS AAPNPAPXKE INHFRGVRKR PWGRYAAEIR DPWKKTRKWL  60
GTFDTAEEAA RAYDEAARSL RGPKAKTNFG YGAGSVPXWR SPPVYGRAGA DRTEKKVDGE  120
EMMVMMNKKK PFSFDLNLPA PLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-22ERF family protein