PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10555.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 289aa MW: 31003.4 Da PI: 7.4157

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10555.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.3e-33	142	199	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp +v++tYeg+H h+ Dr10555.1 142 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCMVKKRVERSSEDPGIVITTYEGQHCHH 199 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MEEKGRALRS EASGDSSWAF AGDGAGISSP SYFHDGESSL LSEFGWSIPL ESSGVSGMDL 60 IDPPPPTLIH ALSPRSAAGS GDAASSSSSD DTAPPPPPPR GSSEPGEKSA SETPSKATKK 120 GQKRTRQPRV AFMTKSDIDH LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCMVKKRVER 180 SSEDPGIVIT TYEGQHCHHS VTFPRGGGAG HIHGAAALAT QLATSSIPHI YYPPISFPQN 240 NSIHPVQLLQ LPHEEVHDSP TLIERVSANS PPTDQGLLGD IVPPGMRNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-57	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr10555.1