PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10558.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 1193aa MW: 132621 Da PI: 8.1573

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10558.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.5	2.8e-33	175	232	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkver+ d++++ei+Y+g+Hnh+k Dr10558.1 175 DDGYNWRKYGQKQVKGSEYPRSYYKCTHQNCPVKKKVERAM-DGQITEIIYKGQHNHPK 232 8**************************************.*************85 PP
2	WRKY	103.5	1.2e-32	346	404	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k+v++tYeg+Hnhe Dr10558.1 346 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNAGCNVRKHVERASSDAKAVITTYEGKHNHE 404 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1193 aa Download sequence
MPGSDDAAAA PSFSSIESLF RGATLDFSPG PMTLLSSFFG EDSELDCRSF SQLLAGAVDS 60 SSLAQPSMEA GSRLDLRRPP EFPLGHEESP VFTLPQGISP TSLLLDSRGF FSSSGTFGML 120 DXQDLQSNXD IGVPRAEXQS LTTSQTSSSA INMMPIQQNL FPDQRSQVVV DKPADDGYNW 180 RKYGQKQVKG SEYPRSYYKC THQNCPVKKK VERAMDGQIT EIIYKGQHNH PKIAAYKRVK 240 EGGGVNELNE NYENDNSGVS MSKRDREYGN GTSEQLSGSS DDEDEVDETE GKTDVGTDCE 300 PNAKRMQFCC LLGRNVDGKV IESNSSHRTV TEPRIIVQTT SEVDLLDDGY RWRKYGQKVV 360 KGNPHPRSYY KCTNAGCNVR KHVERASSDA KAVITTYEGK HNHEVPAARN SSHVTNSANG 420 NVLQPKAQRM TSTNPTAYFS RPNFNDNDQR SVALLQMKQE HEPGLMELFT LFCAFSNGCN 480 GEKIPPPFSP ISSFPGWSSP PPEMGCVASK KAVSVTPAFE RQDSSAVLAS SSLRCRTGSG 540 GPEPKDDGER IESGESGRGS SNFTNSRSFR LRNLHRYIEG EQVAAGWPSW LSAVAGEAIQ 600 GWVPLKADNF EKLEKVGQGT YSSVFRARDV ETGNIVAMKK VRFDNFEPES VRFMAREIQI 660 LRGLDHPNIV KLEGIITSRL SCSIYLVFEY MEHDLVGLSS SPDIQFTESQ VKCYMHQLLS 720 GLEHCHSRGI IHRDIKGANL LVNNEGILKI ADFGLANFCD SRKTQPLTSR VVTLWYRPPE 780 LLLGSTDYEA TVDLWSVGCV FAEMFVKKPI LQGRTEVEQL HKIFKLCGSP SDEYWKKSKL 840 PNATIFKPHH PYANCLWSTF KDLPANAFRL LETFLSVEPH KRGTASSALV SEYFTTKPYA 900 CEPSSLPKYP PNKEIDAKYR EESQRKKQAA KRGHTTVRTS RXYRTSREPF NQNKLAVRQE 960 ESKTNAQDNG EGYVKPNHRS VNGDTRLFVD LQPLATINPS DKGRHVKHIS QGDIPFSGPL 1020 LVPASSGFAW VKKPKEDQPF ARSLSKSSSK RSASGASESS GTLQAKNSLE SRXQSNGDAA 1080 NGASACSGGH GQSEFAKYAM LKKWAQLECP DSFDASDMYH SQKFTEAFYS KDLLPSNHSI 1140 LDYHVEPEKV EFSGPLLSQS HKVDELLRKH DRXIRQATRR SWLRRVTGIK QGK

Sequence ? help Back to Top

Protein Sequence Length: 1193 aa Download sequence

MPGSDDAAAA PSFSSIESLF RGATLDFSPG PMTLLSSFFG EDSELDCRSF SQLLAGAVDS  60
SSLAQPSMEA GSRLDLRRPP EFPLGHEESP VFTLPQGISP TSLLLDSRGF FSSSGTFGML  120
DXQDLQSNXD IGVPRAEXQS LTTSQTSSSA INMMPIQQNL FPDQRSQVVV DKPADDGYNW  180
RKYGQKQVKG SEYPRSYYKC THQNCPVKKK VERAMDGQIT EIIYKGQHNH PKIAAYKRVK  240
EGGGVNELNE NYENDNSGVS MSKRDREYGN GTSEQLSGSS DDEDEVDETE GKTDVGTDCE  300
PNAKRMQFCC LLGRNVDGKV IESNSSHRTV TEPRIIVQTT SEVDLLDDGY RWRKYGQKVV  360
KGNPHPRSYY KCTNAGCNVR KHVERASSDA KAVITTYEGK HNHEVPAARN SSHVTNSANG  420
NVLQPKAQRM TSTNPTAYFS RPNFNDNDQR SVALLQMKQE HEPGLMELFT LFCAFSNGCN  480
GEKIPPPFSP ISSFPGWSSP PPEMGCVASK KAVSVTPAFE RQDSSAVLAS SSLRCRTGSG  540
GPEPKDDGER IESGESGRGS SNFTNSRSFR LRNLHRYIEG EQVAAGWPSW LSAVAGEAIQ  600
GWVPLKADNF EKLEKVGQGT YSSVFRARDV ETGNIVAMKK VRFDNFEPES VRFMAREIQI  660
LRGLDHPNIV KLEGIITSRL SCSIYLVFEY MEHDLVGLSS SPDIQFTESQ VKCYMHQLLS  720
GLEHCHSRGI IHRDIKGANL LVNNEGILKI ADFGLANFCD SRKTQPLTSR VVTLWYRPPE  780
LLLGSTDYEA TVDLWSVGCV FAEMFVKKPI LQGRTEVEQL HKIFKLCGSP SDEYWKKSKL  840
PNATIFKPHH PYANCLWSTF KDLPANAFRL LETFLSVEPH KRGTASSALV SEYFTTKPYA  900
CEPSSLPKYP PNKEIDAKYR EESQRKKQAA KRGHTTVRTS RXYRTSREPF NQNKLAVRQE  960
ESKTNAQDNG EGYVKPNHRS VNGDTRLFVD LQPLATINPS DKGRHVKHIS QGDIPFSGPL  1020
LVPASSGFAW VKKPKEDQPF ARSLSKSSSK RSASGASESS GTLQAKNSLE SRXQSNGDAA  1080
NGASACSGGH GQSEFAKYAM LKKWAQLECP DSFDASDMYH SQKFTEAFYS KDLLPSNHSI  1140
LDYHVEPEKV EFSGPLLSQS HKVDELLRKH DRXIRQATRR SWLRRVTGIK QGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	4e-94	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr10558.1