PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10603.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

C2H2

Protein Properties

Length: 190aa MW: 20215.9 Da PI: 8.0671

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10603.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cgk+F + L H +H Dr10603.1 59 YSCSVCGKVFGSYQALGGHKASH 81 99********9999998888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MASMDEGLGE RHVERWAKGK QRSRRQRSPE MATEEENLAL CLVMLARGES DRWRSAPTYS 60 CSVCGKVFGS YQALGGHKAS HRKPAGGEET VAVAVVGGGG GKGQHQCSVC LKTFASGQAL 120 GGHKRCHYDG SGGVTATETA VVVTRGFDLN LPAVGEMGFE AGRRCAAAEE EEEEVLSPLV 180 MKKPRLLIPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	1e-37	C2H2 family protein

Link Out ? help Back to Top
Ensembl	Dr10603.1