 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dr10622.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
| Family | C2H2 | ||||||||
| Protein Properties | Length: 178aa MW: 19193.7 Da PI: 8.8565 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 14.9 | 7.6e-05 | 43 | 65 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+kC+ Cgk Fs+ L H ++H
Dr10622.1 43 FKCSVCGKEFSSYQALGGHKSSH 65
89************999999988 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 178 aa Download sequence |
MYAKCKSSYF ANQEEYLAYC LVMLAKSDEA HLRPPPPPPK LAFKCSVCGK EFSSYQALGG 60 HKSSHRGPTD GHESRIVNSS ISGTSLSLSG GSRVSGGDKG HKCSICYRSF ASGQALGGHK 120 RCHYWESSTT SSSSAGIKGF DLNLPPLPEF GGVRSWIMGE EEEVQSPSPF KKPRLVVS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G27730.1 | 7e-35 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | Dr10622.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|