PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr10642.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

NAC

Protein Properties

Length: 453aa MW: 49718.5 Da PI: 4.0743

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10642.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	60.1	7.6e-19	18	127	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109 +de++v +L g+++++ +vi evd ++++P +Lp+ +y s+ d ++ + + + + t++gyWk+ g+d ++l+ ++ +vg k+t fy Dr10642.1 18 SDEDIV-SFLGGWKVGDPIPV-NVIGEVDPLSIHPCHLPE------GILYLCSSGDPQSCKANSEIKETSDGYWKSNGEDFRILA-NNLKVGRKTTWEFY 108 588888.99999999****.99**********92......2356666666666677777889*************.9999****** PP NAM 110 kgrapkgektdWvmheyrl 128 +g+ p g+kt W+mhey++ Dr10642.1 109 SGEVPFGKKTGWMMHEYQA 127 ***************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MCPPPSDLLL FGDDALSSDE DIVSFLGGWK VGDPIPVNVI GEVDPLSIHP CHLPEGILYL 60 CSSGDPQSCK ANSEIKETSD GYWKSNGEDF RILANNLKVG RKTTWEFYSG EVPFGKKTGW 120 MMHEYQAEQK PCEGIIATKE SSFMCRIFRH SDQCLNCEGQ HNSEHANCLD DADANSEAVE 180 AMWRSFLQGD KSNHSDQDDE NQTQVFLGEE QRELAITGGN RQDILVVDSS VDVDATDEFL 240 EGDYIELDDL CSLASSSSSS DNSSIMLINS EEYLDVDAFN LRDLESESVH DTSEEHIESG 300 FCMSTLSRPN QVLNNPPPTG LNSEEYFDAH ALLRDLVDTR EEHIDNRFSI STLSRPNQVM 360 SIPPPTGLLN NSIDNLMVEE RTSPLGNGLV SASTLSLLST EPQCNGEAST SGTSHDNSGN 420 QTLNGKVNGS PIRPDSSSVG SKPGKIYFFF GLF

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MCPPPSDLLL FGDDALSSDE DIVSFLGGWK VGDPIPVNVI GEVDPLSIHP CHLPEGILYL  60
CSSGDPQSCK ANSEIKETSD GYWKSNGEDF RILANNLKVG RKTTWEFYSG EVPFGKKTGW  120
MMHEYQAEQK PCEGIIATKE SSFMCRIFRH SDQCLNCEGQ HNSEHANCLD DADANSEAVE  180
AMWRSFLQGD KSNHSDQDDE NQTQVFLGEE QRELAITGGN RQDILVVDSS VDVDATDEFL  240
EGDYIELDDL CSLASSSSSS DNSSIMLINS EEYLDVDAFN LRDLESESVH DTSEEHIESG  300
FCMSTLSRPN QVLNNPPPTG LNSEEYFDAH ALLRDLVDTR EEHIDNRFSI STLSRPNQVM  360
SIPPPTGLLN NSIDNLMVEE RTSPLGNGLV SASTLSLLST EPQCNGEAST SGTSHDNSGN  420
QTLNGKVNGS PIRPDSSSVG SKPGKIYFFF GLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	4e-19	NAC family protein

Link Out ? help Back to Top
Ensembl	Dr10642.1