PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10664.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family HB-other
Protein Properties Length: 148aa    MW: 17046.6 Da    PI: 9.3297
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10664.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.59.1e-084787444
               -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS
   Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44
               ++++t+eq++ Le  F +++++   ++ +LA+++gL+ +qV
  Dr10664.1 47 KRRLTDEQVKFLEMNFGEEKKLESGRKMHLASEIGLDPKQV 87
               5689************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MTHVEEKMLL SSLTAEFYSQ TPPQGEAKVK RRRRKKARGD VDMEVKKRRL TDEQVKFLEM  60
NFGEEKKLES GRKMHLASEI GLDPKQVLKL KKRLEEAEEL IKKISGGMGS SPSSSFSNNR  120
VEGEADQLMY MSEYSYNGLM DWMCLYGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13035KRRRRK
23036KRRRRKK
33048KRRRRKKARGDVDMEVKKR
43049KRRRRKKARGDVDMEVKKRR
53149KRRRRKKARGDVDMEVKKR
63150KRRRRKKARGDVDMEVKKRR
73250KRRRRKKARGDVDMEVKKR
83251KRRRRKKARGDVDMEVKKRR
93352KRRRRKKARGDVDMEVKKRR
103453KRRRRKKARGDVDMEVKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.12e-14HD-ZIP family protein