![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Dr10668.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
| Family | GRAS | ||||||||
| Protein Properties | Length: 456aa MW: 49268.5 Da PI: 5.9577 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 248.5 | 2.6e-76 | 91 | 455 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
+lLl++A a++sgdl a+++Larl++l s +g p++R f+ L++ l++ pp + s+ + +++++a+k +s++sPi++f+ +taNq+
Dr10668.1 91 DLLLSAASAIDSGDLPSAHSILARLNHLfPSISGPPLHRSSLLFKDSLSSLLSS-------PSPPLSPSPIDLVRRISAHKSLSDLSPIPQFTSFTANQT 183
69**************************99***********************9.......34444455567**************************** PP
GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
+le++ + + +H iDfd+s G+QW ++ q++a+R+ ++ppslR+T++ s +++ + +++L++fA++lg++f+++++ + +l ++ l++ r+
Dr10668.1 184 LLESLVSTsSSIHLIDFDLSLGGQWSSFAQEIAARSrssrSPPPSLRLTAILS---DDSPDSSLAADNLRDFARSLGLRFSIDLVRVASLGTFALSSVRL 280
***9755549***********************99988888899********9...688999999********************999************ PP
GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.adh...nsesFlerflealeyysalfdsl.eaklpres..eerikvErel 289
++ +++ V l+ +++r + +++ ++L++++++sP+ vv+v+ e ++ + +sF + +++ +e+ys+++dsl +a l++ ++ + +Er+l
Dr10668.1 281 STADSTGVVLSPAIFRAIGPDPASS---ADLLRFIRRTSPRSVVFVDTEpCSSspsSPPSFKRAMASGIEFYSSVLDSLdSAALATGLgdDHVRRIERFL 377
**************99994444444...58*******************73332223449*******************6566655545577889***** PP
GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++++++++v + ga+ Wre l +aGF+p+p+se++++qa+ llr+ ++dg++v ++g++vl Wk+r L s+SaWr
Dr10668.1 378 IRPRVTSWVQACGAH-------PTPWRETLASAGFSPAPFSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWR 455
**************8.......789***********************************************************8 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 456 aa Download sequence |
MKSTSDSPSP ISSLELDFPS LKPPTSLSLP PTPFFYEPTS VLDPNLTSHD SHLTSSWDFP 60 EPDWSFLLPD PQNPDYTLPP PPPLFDLSHL DLLLSAASAI DSGDLPSAHS ILARLNHLFP 120 SISGPPLHRS SLLFKDSLSS LLSSPSPPLS PSPIDLVRRI SAHKSLSDLS PIPQFTSFTA 180 NQTLLESLVS TSSSIHLIDF DLSLGGQWSS FAQEIAARSR SSRSPPPSLR LTAILSDDSP 240 DSSLAADNLR DFARSLGLRF SIDLVRVASL GTFALSSVRL STADSTGVVL SPAIFRAIGP 300 DPASSADLLR FIRRTSPRSV VFVDTEPCSS SPSSPPSFKR AMASGIEFYS SVLDSLDSAA 360 LATGLGDDHV RRIERFLIRP RVTSWVQACG AHPTPWRETL ASAGFSPAPF SEFTESQAEW 420 LLRRAPVDGF HVARRDGAMV LSWKGRDLAS TSAWRC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G36710.1 | 3e-45 | GRAS family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | Dr10668.1 |




