PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10668.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family GRAS
Protein Properties Length: 456aa    MW: 49268.5 Da    PI: 5.9577
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10668.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS248.52.6e-76914553374
       GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                +lLl++A a++sgdl  a+++Larl++l  s +g p++R    f+  L++ l++         pp + s+ + +++++a+k +s++sPi++f+ +taNq+
  Dr10668.1  91 DLLLSAASAIDSGDLPSAHSILARLNHLfPSISGPPLHRSSLLFKDSLSSLLSS-------PSPPLSPSPIDLVRRISAHKSLSDLSPIPQFTSFTANQT 183
                69**************************99***********************9.......34444455567**************************** PP

       GRAS 102 Ileavege.ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                +le++ +  + +H iDfd+s G+QW ++ q++a+R+    ++ppslR+T++ s   +++   +  +++L++fA++lg++f+++++ + +l ++ l++ r+
  Dr10668.1 184 LLESLVSTsSSIHLIDFDLSLGGQWSSFAQEIAARSrssrSPPPSLRLTAILS---DDSPDSSLAADNLRDFARSLGLRFSIDLVRVASLGTFALSSVRL 280
                ***9755549***********************99988888899********9...688999999********************999************ PP

       GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.adh...nsesFlerflealeyysalfdsl.eaklpres..eerikvErel 289
                ++ +++ V l+ +++r    + +++    ++L++++++sP+ vv+v+ e ++    + +sF + +++ +e+ys+++dsl +a l++    ++ + +Er+l
  Dr10668.1 281 STADSTGVVLSPAIFRAIGPDPASS---ADLLRFIRRTSPRSVVFVDTEpCSSspsSPPSFKRAMASGIEFYSSVLDSLdSAALATGLgdDHVRRIERFL 377
                **************99994444444...58*******************73332223449*******************6566655545577889***** PP

       GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                ++++++++v + ga+          Wre l +aGF+p+p+se++++qa+ llr+ ++dg++v  ++g++vl Wk+r L s+SaWr
  Dr10668.1 378 IRPRVTSWVQACGAH-------PTPWRETLASAGFSPAPFSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWR 455
                **************8.......789***********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MKSTSDSPSP ISSLELDFPS LKPPTSLSLP PTPFFYEPTS VLDPNLTSHD SHLTSSWDFP  60
EPDWSFLLPD PQNPDYTLPP PPPLFDLSHL DLLLSAASAI DSGDLPSAHS ILARLNHLFP  120
SISGPPLHRS SLLFKDSLSS LLSSPSPPLS PSPIDLVRRI SAHKSLSDLS PIPQFTSFTA  180
NQTLLESLVS TSSSIHLIDF DLSLGGQWSS FAQEIAARSR SSRSPPPSLR LTAILSDDSP  240
DSSLAADNLR DFARSLGLRF SIDLVRVASL GTFALSSVRL STADSTGVVL SPAIFRAIGP  300
DPASSADLLR FIRRTSPRSV VFVDTEPCSS SPSSPPSFKR AMASGIEFYS SVLDSLDSAA  360
LATGLGDDHV RRIERFLIRP RVTSWVQACG AHPTPWRETL ASAGFSPAPF SEFTESQAEW  420
LLRRAPVDGF HVARRDGAMV LSWKGRDLAS TSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.13e-45GRAS family protein