PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10730.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family Trihelix
Protein Properties Length: 143aa    MW: 15551.7 Da    PI: 10.7467
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.72e-151493887
   trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
               m + gf+rs+k+Ckek en+nk++kk+ke++kkr +e+ +tc yf+ql+a
  Dr10730.1  1 MIKLGFNRSSKKCKEKRENINKYFKKVKESNKKR-PEDAKTCLYFHQLDA 49
               5678*****************************8.99999********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MIKLGFNRSS KKCKEKRENI NKYFKKVKES NKKRPEDAKT CLYFHQLDAL YQRKLAAGAV  60
GGGGVGGGSS NVVSSQALQT KSTSSNQVRH DTTMQSPQQV TPAMVVPETE GKSDGGAQIP  120
TSNGRTSMTF FKETSSGSVM KKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.12e-26Trihelix family protein