PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr10829.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family bHLH
Protein Properties Length: 146aa    MW: 15822.2 Da    PI: 10.6568
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr10829.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.7e-112668754
               HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
               ++ r+RR+ri ++f  L++l+P  +      K++ +++Le+A++Y+k L
  Dr10829.1 26 IAARQRRHRISDRFKVLKSLVPGgN------KMDTVSMLEEAIHYVKFL 68
               567*******************955......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MSPRKGVGKR SGGGRTIKLS TEPQSIAARQ RRHRISDRFK VLKSLVPGGN KMDTVSMLEE  60
AIHYVKFLKT QISLHQAALM PPPPPFPFSS SDITMNASHL STTIDASPLP PSSSSSSSSS  120
SSLLPYPPFI SFKGEAEMLS YVGLNY